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  5. HORVU1Hr1G020620.7

HORVU1Hr1G020620.7


Description : component *(ELP2) of ELONGATOR transcription elongation complex


Gene families : OG_42_0006904 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006904_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G020620.7
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Bradi3g39160 No alias elongator protein 2 0.06 Orthogroups_2024-Update
GRMZM2G042371 No alias elongator protein 2 0.03 Orthogroups_2024-Update
Sobic.007G220300.1 No alias component *(ELP2) of ELONGATOR transcription elongation complex 0.03 Orthogroups_2024-Update
evm.model.contig_682.2 No alias (at1g49540 : 134.0) elongator protein 2 (ELP2);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
BP GO:0016126 sterol biosynthetic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0018196 peptidyl-asparagine modification IEP Predicted GO
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 224 265
IPR001680 WD40_repeat 683 714
IPR001680 WD40_repeat 632 666
IPR001680 WD40_repeat 403 440
No external refs found!