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  5. HORVU1Hr1G021990.11

HORVU1Hr1G021990.11


Description : regulatory protein of DNA methylation pathway *(IDN/IDP)


Gene families : OG_42_0000478 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G021990.11
Cluster HCAA Clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
Bradi2g34220 No alias XH/XS domain-containing protein 0.03 Orthogroups_2024-Update
Bradi2g43557 No alias XH/XS domain-containing protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0031047 gene silencing by RNA IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR005379 Uncharacterised_XH 535 591
IPR005381 Znf-XS_domain 80 120
IPR005380 XS_domain 150 253
No external refs found!