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  5. HORVU1Hr1G024710.2

HORVU1Hr1G024710.2


Description : component *(uL16) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0001900 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001900_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G024710.2
Cluster HCAA Clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
437527 No alias Ribosomal protein L16p/L10e family protein 0.03 Orthogroups_2024-Update
A4A49_56503 No alias 60s ribosomal protein l10 0.1 Orthogroups_2024-Update
A4A49_60639 No alias 60s ribosomal protein l10 0.17 Orthogroups_2024-Update
At1g14320 No alias 60S ribosomal protein L10-1... 0.03 Orthogroups_2024-Update
At1g26910 No alias 60S ribosomal protein L10-2... 0.02 Orthogroups_2024-Update
At1g66580 No alias 60S ribosomal protein L10-3... 0.04 Orthogroups_2024-Update
Bradi2g34440 No alias Ribosomal protein L16p/L10e family protein 0.1 Orthogroups_2024-Update
Brara.B01878.1 No alias component *(uL16) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.F00957.1 No alias component *(uL16) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Brara.G02465.1 No alias component *(uL16) of large ribosomal-subunit (LSU) proteome 0.15 Orthogroups_2024-Update
Brara.G02907.1 No alias component *(uL16) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Brara.H02579.1 No alias component *(uL16) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Cre09.g388200 No alias senescence associated gene 24 0.09 Orthogroups_2024-Update
GRMZM2G087233 No alias senescence associated gene 24 0.03 Orthogroups_2024-Update
Glyma.02G220000 No alias Ribosomal protein L16p/L10e family protein 0.11 Orthogroups_2024-Update
Glyma.06G140900 No alias Ribosomal protein L16p/L10e family protein 0.05 Orthogroups_2024-Update
Glyma.14G187800 No alias Ribosomal protein L16p/L10e family protein 0.12 Orthogroups_2024-Update
MA_17326g0010 No alias (p93847|rl10_solme : 399.0) 60S ribosomal protein L10... 0.04 Orthogroups_2024-Update
Mp4g23990.1 No alias component RPL10 of LSU proteome component 0.02 Orthogroups_2024-Update
PSME_00015731-RA No alias (p93847|rl10_solme : 394.0) 60S ribosomal protein L10... 0.07 Orthogroups_2024-Update
PSME_00042423-RA No alias (p93847|rl10_solme : 402.0) 60S ribosomal protein L10... 0.05 Orthogroups_2024-Update
Pp1s22_94V6 No alias 60s ribosomal protein l10-3 0.19 Orthogroups_2024-Update
Pp1s2_197V6 No alias 60s ribosomal protein l10-3 0.06 Orthogroups_2024-Update
Pp1s347_24V6 No alias 60s ribosomal protein l10-3 0.11 Orthogroups_2024-Update
Pp1s447_11V6 No alias 60s ribosomal protein l10-3 0.02 Orthogroups_2024-Update
Seita.1G023800.1 No alias component *(uL16) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Seita.3G099700.1 No alias component *(uL16) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Seita.7G273300.1 No alias component *(uL16) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Sobic.001G177800.1 No alias component *(uL16) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Sobic.004G103700.1 No alias component *(uL16) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Solyc06g007520 No alias 60S ribosomal protein L10 (AHRD V3.3 *** RL10_SOLME) 0.17 Orthogroups_2024-Update
Solyc06g082650 No alias 60S ribosomal protein L10 (AHRD V3.3 *** RL10_SOLME) 0.18 Orthogroups_2024-Update
Solyc06g082670 No alias 60S ribosomal protein L10 (AHRD V3.3 *** RL10_SOLME) 0.19 Orthogroups_2024-Update
Sopen06g002430 No alias Ribosomal protein L16p/L10e 0.15 Orthogroups_2024-Update
Sopen06g034040 No alias Ribosomal protein L16p/L10e 0.1 Orthogroups_2024-Update
Sopen06g034060 No alias Ribosomal protein L16p/L10e 0.09 Orthogroups_2024-Update
evm.model.tig00001424.5 No alias (p45636|rl102_orysa : 214.0) 60S ribosomal protein L10-2... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 36 190
No external refs found!