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  5. HORVU1Hr1G025500.1

HORVU1Hr1G025500.1


Description : R-loop reader protein *(ALBA1/2)


Gene families : OG_42_0000995 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G025500.1
Cluster HCAA Clusters: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G174565 No alias Alba DNA/RNA-binding protein 0.04 Orthogroups_2024-Update
Glyma.07G031600 No alias Alba DNA/RNA-binding protein 0.03 Orthogroups_2024-Update
LOC_Os02g10810 No alias protein of unknown function domain containing protein, expressed 0.03 Orthogroups_2024-Update
Mp6g20280.1 No alias R-loop reader protein (ALBA1/2) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 56 108
No external refs found!