1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU1Hr1G025600.3

HORVU1Hr1G025600.3


Description : E3 ubiquitin ligase *(DRR1)


Gene families : OG_42_0000431 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G025600.3
Cluster HCAA Clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
A4A49_41006 No alias e3 ubiquitin-protein ligase 0.03 Orthogroups_2024-Update
Brara.G02761.1 No alias E3 ubiquitin ligase *(RIE1) 0.02 Orthogroups_2024-Update
Brara.I05095.1 No alias E3 ubiquitin ligase *(RIE1) 0.03 Orthogroups_2024-Update
LOC_Os09g15430 No alias zinc finger family protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.002G155200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Solyc08g067770 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061GNC5_THECC) 0.03 Orthogroups_2024-Update
Sopen10g031610 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 347 388
No external refs found!