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  5. HORVU1Hr1G035720.5

HORVU1Hr1G035720.5


Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer


Gene families : OG_42_0000599 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G035720.5
Cluster HCAA Clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Cre02.g120100 No alias ribulose bisphosphate carboxylase small chain 1A 0.03 Orthogroups_2024-Update
Kfl00002_0370 kfl00002_0370_v1.1 (q40250|rbs_lacsa : 209.0) Ribulose bisphosphate... 0.02 Orthogroups_2024-Update
Kfl00012_0630 kfl00012_0630_v1.1 (p26573|rbs8_nicpl : 186.0) Ribulose bisphosphate... 0.01 Orthogroups_2024-Update
MA_47626g0010 No alias (p10053|rbs_pinth : 299.0) Ribulose bisphosphate... 0.07 Orthogroups_2024-Update
Mp4g05990.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 Orthogroups_2024-Update
Mp4g06000.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
Mp4g15070.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 Orthogroups_2024-Update
Potri.004G100000 No alias ribulose bisphosphate carboxylase small chain 1A 0.02 Orthogroups_2024-Update
Pp1s312_46V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.02 Orthogroups_2024-Update
Pp1s374_50V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.02 Orthogroups_2024-Update
Pp1s459_14V6 No alias Ribulose bisphosphate carboxylase small chain,... 0.03 Orthogroups_2024-Update
Pp1s46_42V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.04 Orthogroups_2024-Update
Pp1s545_4V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.02 Orthogroups_2024-Update
Seita.3G269500.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
Seita.3G269600.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
Seita.3G312000.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 Orthogroups_2024-Update
Seita.3G312400.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 Orthogroups_2024-Update
Sobic.005G042000.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.1 Orthogroups_2024-Update
Solyc02g063150 No alias RuBP carboxylase small subunit 0.03 Orthogroups_2024-Update
Solyc02g085950 No alias cell wall protein X77373 0.04 Orthogroups_2024-Update
Sopen02g030630 No alias Ribulose bisphosphate carboxylase, small chain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR024680 RuBisCO_ssu_N 8 29
IPR000894 RuBisCO_sc_dom 60 167
No external refs found!