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  5. Solyc03g071670

Solyc03g071670


Description : LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3 *** A0A061FPQ4_THECC)


Gene families : OG_42_0001919 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001919_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g071670
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
At2g27950 No alias Ring/U-Box superfamily protein... 0.03 Orthogroups_2024-Update
Solyc03g071680 No alias LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3... 0.06 Orthogroups_2024-Update
Sopen03g019920 No alias Zinc finger, C3HC4 type (RING finger) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005758 mitochondrial intermembrane space IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016530 metallochaperone activity IEP Predicted GO
MF GO:0016531 copper chaperone activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
CC GO:0031970 organelle envelope lumen IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!