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  5. HORVU1Hr1G037550.5

HORVU1Hr1G037550.5


Description : E3 ubiquitin ligase


Gene families : OG_42_0000680 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G037550.5
Cluster HCAA Clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
270353 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
A4A49_22241 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_24786 No alias hypothetical protein 0.02 Orthogroups_2024-Update
At3g47160 No alias RING/U-box superfamily protein... 0.03 Orthogroups_2024-Update
At5g01520 No alias AtAIRP2 [Source:UniProtKB/TrEMBL;Acc:A0A178U9T4] 0.03 Orthogroups_2024-Update
Brara.C00028.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.F01768.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
GRMZM2G148908 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G144300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G180900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os01g67850 No alias zinc finger, RING-type, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g46700 No alias zinc finger, RING-type, putative, expressed 0.04 Orthogroups_2024-Update
Potri.010G053000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G089800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.9G238100.1 No alias E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Solyc02g078460 No alias abscisic acid-insensitive RING protein 4-like 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 138 177
No external refs found!