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  5. HORVU1Hr1G038130.3

HORVU1Hr1G038130.3


Description : E3 ubiquitin ligase *(CHY)


Gene families : OG_42_0001040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G038130.3
Cluster HCAA Clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G074300 No alias CHY-type/CTCHY-type/RING-type Zinc finger protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G003910.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G234200.1 No alias E3 ubiquitin ligase *(CHY) 0.04 Orthogroups_2024-Update
Seita.9G541500.1 No alias E3 ubiquitin ligase *(CHY) 0.03 Orthogroups_2024-Update
Sobic.008G117200.1 No alias E3 ubiquitin ligase *(CHY) 0.03 Orthogroups_2024-Update
Solyc06g054540 No alias CHY-type/CTCHY-type/RING-type Zinc finger protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0030260 entry into host cell IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0044409 entry into host IEP Predicted GO
BP GO:0044419 interspecies interaction between organisms IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
BP GO:0046718 viral entry into host cell IEP Predicted GO
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Predicted GO
BP GO:0051701 interaction with host IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051806 entry into cell of other organism involved in symbiotic interaction IEP Predicted GO
BP GO:0051828 entry into other organism involved in symbiotic interaction IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008913 Znf_CHY 10 92
IPR039512 RCHY1_zinc-ribbon 194 232
IPR001841 Znf_RING 146 189
No external refs found!