1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU1Hr1G038680.8

HORVU1Hr1G038680.8


Description : Unknown function


Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G038680.8
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
165043 No alias TCP-1/cpn60 chaperonin family protein 0.02 Orthogroups_2024-Update
At2g33210 No alias Chaperonin CPN60-like 1, mitochondrial... 0.04 Orthogroups_2024-Update
At3g13860 No alias Chaperonin CPN60-like 2, mitochondrial... 0.03 Orthogroups_2024-Update
At5g56500 No alias Chaperonin 60 subunit beta 3, chloroplastic... 0.04 Orthogroups_2024-Update
Bradi1g50270 No alias chaperonin 60 beta 0.03 Orthogroups_2024-Update
Bradi1g75520 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Bradi2g18260 No alias heat shock protein 60-3A 0.03 Orthogroups_2024-Update
Bradi3g28070 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Bradi4g38090 No alias TCP-1/cpn60 chaperonin family protein 0.12 Orthogroups_2024-Update
Brara.B00789.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.06 Orthogroups_2024-Update
Brara.C01696.1 No alias chaperone *(Hsp60) 0.05 Orthogroups_2024-Update
Brara.C03496.1 No alias chaperone *(Hsp60) 0.07 Orthogroups_2024-Update
Brara.C03936.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Brara.E01070.1 No alias chaperone *(Hsp60) 0.04 Orthogroups_2024-Update
Cre06.g309100 No alias heat shock protein 60 0.02 Orthogroups_2024-Update
GRMZM2G083716 No alias chaperonin 60 beta 0.02 Orthogroups_2024-Update
GRMZM2G416120 No alias heat shock protein 60 0.05 Orthogroups_2024-Update
Glyma.07G009600 No alias heat shock protein 60-3A 0.04 Orthogroups_2024-Update
Glyma.10G127800 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
Glyma.11G195900 No alias chaperonin-60alpha 0.05 Orthogroups_2024-Update
Glyma.12G078100 No alias chaperonin-60alpha 0.02 Orthogroups_2024-Update
Glyma.15G250500 No alias TCP-1/cpn60 chaperonin family protein 0.05 Orthogroups_2024-Update
Glyma.20G079300 No alias heat shock protein 60 0.05 Orthogroups_2024-Update
HORVU4Hr1G078820.3 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Kfl00076_0150 kfl00076_0150_v1.... (p08927|rubb_pea : 851.0) RuBisCO large subunit-binding... 0.03 Orthogroups_2024-Update
Kfl00292_0140 kfl00292_0140_v1.1 (q05046|ch62_cucma : 837.0) Chaperonin CPN60-2,... 0.01 Orthogroups_2024-Update
MA_10436324g0010 No alias (at3g23990 : 851.0) mitochondrial chaperonin HSP. assist... 0.05 Orthogroups_2024-Update
Mp6g16880.1 No alias chaperone (Hsp60) 0.02 Orthogroups_2024-Update
PSME_00008710-RA No alias (q05046|ch62_cucma : 823.0) Chaperonin CPN60-2,... 0.02 Orthogroups_2024-Update
Potri.001G054400 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
Potri.002G252900 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Potri.003G173900 No alias heat shock protein 60 0.05 Orthogroups_2024-Update
Pp1s114_95V6 No alias rubisco subunit binding-protein alpha subunit 0.02 Orthogroups_2024-Update
Pp1s276_75V6 No alias ru large subunit-binding protein subunit beta 0.02 Orthogroups_2024-Update
Seita.2G129300.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Seita.9G231400.1 No alias chaperone *(Hsp60) 0.07 Orthogroups_2024-Update
Sobic.001G228200.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Solyc02g068730 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.06 Orthogroups_2024-Update
Solyc03g121640 No alias Chaperonin Cpn60 (AHRD V3.3 *** A0A124SDT3_CYNCS) 0.05 Orthogroups_2024-Update
Solyc09g091180 No alias Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) 0.12 Orthogroups_2024-Update
Sopen01g016850 No alias TCP-1/cpn60 chaperonin family 0.02 Orthogroups_2024-Update
Sopen03g039670 No alias TCP-1/cpn60 chaperonin family 0.02 Orthogroups_2024-Update
Sopen03g040450 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
Sopen05g031970 No alias TCP-1/cpn60 chaperonin family 0.05 Orthogroups_2024-Update
Sopen09g034150 No alias TCP-1/cpn60 chaperonin family 0.09 Orthogroups_2024-Update
evm.model.tig00001107.20 No alias (q42694|ruba_chlre : 473.0) RuBisCO large... 0.02 Orthogroups_2024-Update
evm.model.tig00001269.7 No alias (q05046|ch62_cucma : 728.0) Chaperonin CPN60-2,... 0.01 Orthogroups_2024-Update
evm.model.tig00020943.69 No alias (p08823|ruba_wheat : 426.0) RuBisCO large... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004019 adenylosuccinate synthase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 125 651
No external refs found!