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  5. HORVU1Hr1G042330.1

HORVU1Hr1G042330.1


Description : Unknown function


Gene families : OG_42_0000731 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000731_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G042330.1
Cluster HCAA Clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G059460.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G060470.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G055990.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G066390.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G055120.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!