- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : pre-mRNA-processing protein *(PRP40C)
Gene families : OG_42_0005521 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005521_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU1Hr1G042550.1 | |
| Cluster | HCAA Clusters: Cluster_50 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi3g29247 | No alias | pre-mRNA-processing protein 40C | 0.05 | Orthogroups_2024-Update | |
| Pp1s39_334V6 | No alias | No description available | 0.02 | Orthogroups_2024-Update | |
| Seita.9G215900.1 | No alias | pre-mRNA-processing protein *(PRP40C) | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G214800.2 | No alias | pre-mRNA-processing protein *(PRP40C) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003876 | AMP deaminase activity | IEP | Predicted GO |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Predicted GO |
| MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | Predicted GO |
| BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006606 | protein import into nucleus | IEP | Predicted GO |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Predicted GO |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Predicted GO |
| MF | GO:0015923 | mannosidase activity | IEP | Predicted GO |
| MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | Predicted GO |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predicted GO |
| BP | GO:0017038 | protein import | IEP | Predicted GO |
| MF | GO:0019239 | deaminase activity | IEP | Predicted GO |
| BP | GO:0032261 | purine nucleotide salvage | IEP | Predicted GO |
| BP | GO:0032264 | IMP salvage | IEP | Predicted GO |
| BP | GO:0033365 | protein localization to organelle | IEP | Predicted GO |
| BP | GO:0034504 | protein localization to nucleus | IEP | Predicted GO |
| BP | GO:0034613 | cellular protein localization | IEP | Predicted GO |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
| BP | GO:0043094 | cellular metabolic compound salvage | IEP | Predicted GO |
| BP | GO:0043101 | purine-containing compound salvage | IEP | Predicted GO |
| BP | GO:0043173 | nucleotide salvage | IEP | Predicted GO |
| BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
| MF | GO:0047623 | adenosine-phosphate deaminase activity | IEP | Predicted GO |
| BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
| BP | GO:0051170 | import into nucleus | IEP | Predicted GO |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Predicted GO |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Predicted GO |
| No external refs found! |