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  5. HORVU1Hr1G044750.1

HORVU1Hr1G044750.1


Description : component *(PRPF6) of U5 snRNP complex


Gene families : OG_42_0003515 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003515_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G044750.1
Cluster HCAA Clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
PSME_00028102-RA No alias (at4g03430 : 400.0) Encodes a nuclear protein similar to... 0.03 Orthogroups_2024-Update
Sobic.008G112800.1 No alias component *(PRPF6) of U5 snRNP complex 0.03 Orthogroups_2024-Update
Sopen07g028130 No alias PRP1 splicing factor, N-terminal 0.03 Orthogroups_2024-Update
evm.model.contig_2075.8 No alias (at4g03430 : 345.0) Encodes a nuclear protein similar to... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010491 PRP1_N 31 195
No external refs found!