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  5. HORVU1Hr1G049980.3

HORVU1Hr1G049980.3


Description : AHL clade-B transcription factor


Gene families : OG_42_0000248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G049980.3
Cluster HCAA Clusters: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Bradi4g33850 No alias AT hook motif DNA-binding family protein 0.04 Orthogroups_2024-Update
Brara.D02046.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Glyma.03G011200 No alias AT hook motif DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.09G268900 No alias AT-hook motif nuclear-localized protein 1 0.03 Orthogroups_2024-Update
Glyma.20G212200 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
LOC_Os06g22030 No alias AT hook motif domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.6G084100.1 No alias AHL clade-B transcription factor 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0032392 DNA geometric change IEP Predicted GO
BP GO:0032508 DNA duplex unwinding IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 248 361
No external refs found!