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  5. HORVU1Hr1G051660.8

HORVU1Hr1G051660.8


Description : MADS/AGL-type transcription factor


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G051660.8
Cluster HCAA Clusters: Cluster_313

Target Alias Description ECC score Gene Family Method Actions
A4A49_14235 No alias developmental protein sepallata 1 0.02 Orthogroups_2024-Update
A4A49_14828 No alias agamous-like mads-box protein agl104 0.03 Orthogroups_2024-Update
A4A49_19521 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
At2g42830 No alias K-box region and MADS-box transcription factor family... 0.03 Orthogroups_2024-Update
At5g20240 No alias Floral homeotic protein PISTILLATA... 0.03 Orthogroups_2024-Update
Bradi1g39927 No alias AGAMOUS-like 23 0.03 Orthogroups_2024-Update
Glyma.20G136700 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
HORVU7Hr1G081070.1 No alias MADS/AGL-type transcription factor 0.05 Orthogroups_2024-Update
LOC_Os05g34940 No alias OsMADS4 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g41370 No alias OsMADS18 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g41950 No alias OsMADS7 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
Potri.001G284600 No alias AGAMOUS-like 17 0.03 Orthogroups_2024-Update
Seita.1G273400.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Seita.3G098400.1 No alias MADS/AGL-type transcription factor 0.01 Orthogroups_2024-Update
Solyc08g080100 No alias MADS box transcription factor (AHRD V3.3 *** C3PTE7_POPTO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!