1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU1Hr1G052450.8

HORVU1Hr1G052450.8


Description : EC_4.3 carbon-nitrogen lyase


Gene families : OG_42_0001124 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G052450.8
Cluster HCAA Clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Bradi1g21580 No alias strictosidine synthase-like 4 0.03 Orthogroups_2024-Update
LOC_Os07g42250 No alias strictosidine synthase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00045839-RA No alias (at3g51440 : 276.0) Calcium-dependent phosphotriesterase... 0.03 Orthogroups_2024-Update
Sobic.002G373200.1 No alias EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
MF GO:0016844 strictosidine synthase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005542 folic acid binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 157 243
No external refs found!