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At2g42740


Description : 60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]


Gene families : OG_42_0001107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001107_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g42740
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Solyc07g055230 No alias homeodomain GLABROUS 7 (AHRD V3.3 --* AT5G52170.3) 0.03 Orthogroups_2024-Update
Solyc10g007980 No alias Ribosomal L5P family protein (AHRD V3.3 *** AT5G45775.2) 0.04 Orthogroups_2024-Update
Solyc12g010930 No alias Ribosomal L5P family protein (AHRD V3.3 *** AT5G45775.2) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR031310 Ribosomal_L5_N 9 62
IPR031309 Ribosomal_L5_C 66 164
No external refs found!