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  5. HORVU1Hr1G056530.1

HORVU1Hr1G056530.1


Description : histone *(H2B)


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G056530.1
Cluster HCAA Clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
At2g37470 No alias Histone H2B.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUS0] 0.03 Orthogroups_2024-Update
At3g09480 No alias Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178V4X7] 0.02 Orthogroups_2024-Update
Brara.B01057.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Brara.F01827.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Brara.J01445.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
Cre06.g264800 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g265400 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g266750 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g268250 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g274250 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g274750 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g276550 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g276900 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g504700 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g506200 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre13.g570050 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708600 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g711750 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G141432 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G141600 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G065100 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G065400 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G173400 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G191600 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G078530.3 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU3Hr1G086610.4 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU4Hr1G009040.2 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU7Hr1G110310.1 No alias histone *(H2B) 0.04 Orthogroups_2024-Update
LOC_Os01g05630 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.02 Orthogroups_2024-Update
MA_10428006g0010 No alias (at3g45980 : 145.0) Encodes a histone 2B (H2B) protein.... 0.02 Orthogroups_2024-Update
PSME_00000376-RA No alias (p54347|h2b4_chlre : 153.0) Histone H2B.4 (H2B-IV) -... 0.05 Orthogroups_2024-Update
PSME_00041882-RA No alias (at5g22880 : 162.0) Encodes a histone 2B (H2B) protein.... 0.04 Orthogroups_2024-Update
Potri.009G028001 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Pp1s117_2V6 No alias histone h2b 0.02 Orthogroups_2024-Update
Sobic.007G149600.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Sobic.007G221800.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Solyc02g038690 No alias Histone H2B (AHRD V3.3 *** K4B5W3_SOLLC) 0.02 Orthogroups_2024-Update
Solyc03g071620 No alias Histone H2B (AHRD V3.3 *** K4BHJ2_SOLLC) 0.03 Orthogroups_2024-Update
Solyc05g055440 No alias Histone H2B (AHRD V3.3 *** K4C2M0_SOLLC) 0.02 Orthogroups_2024-Update
Solyc06g005390 No alias Histone H2B (AHRD V3.3 *** K4C323_SOLLC) 0.02 Orthogroups_2024-Update
Solyc06g074790 No alias Histone H2B (AHRD V3.3 *** M1AAN4_SOLTU) 0.02 Orthogroups_2024-Update
Solyc06g075800 No alias Histone H2B (AHRD V3.3 *** K4C9U5_SOLLC) 0.02 Orthogroups_2024-Update
Solyc11g007920 No alias Histone H2B (AHRD V3.3 *** K4D553_SOLLC) 0.02 Orthogroups_2024-Update
Sopen05g033890 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g031230 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g032230 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen11g026180 No alias Core histone H2A/H2B/H3/H4 0.06 Orthogroups_2024-Update
Sopen12g006850 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 64 187
No external refs found!