Description : component *(NRPA3) of RNA polymerase I complex & component *(NRPC3) of RNA polymerase III complex
Gene families : OG_42_0005297 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005297_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Hordeum vulgare: HORVU1Hr1G057510.1 | |
Cluster | HCAA Clusters: Cluster_28 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_22471 | No alias | dna-directed rna polymerases ii, iv and v subunit 3 | 0.02 | Orthogroups_2024-Update | |
At1g60620 | No alias | RNA polymerase I subunit 43 [Source:UniProtKB/TrEMBL;Acc:Q39216] | 0.03 | Orthogroups_2024-Update | |
At1g60850 | No alias | DNA-directed RNA polymerase family protein... | 0.06 | Orthogroups_2024-Update | |
Bradi1g15810 | No alias | RNA polymerase I subunit 43 | 0.02 | Orthogroups_2024-Update | |
Brara.I01542.1 | No alias | component *(NRPC3) of RNA polymerase III complex &... | 0.02 | Orthogroups_2024-Update | |
Cre07.g313302 | No alias | RNA polymerase I subunit 43 | 0.05 | Orthogroups_2024-Update | |
Glyma.18G075300 | No alias | RNA polymerase I subunit 43 | 0.04 | Orthogroups_2024-Update | |
Kfl00162_0140 | kfl00162_0140_v1.1 | (at1g60620 : 385.0) RNA polymerase I subunit 43... | 0.01 | Orthogroups_2024-Update | |
Potri.001G369500 | No alias | RNA polymerase I subunit 43 | 0.04 | Orthogroups_2024-Update | |
Seita.2G114800.1 | No alias | component *(NRPA3) of RNA polymerase I complex &... | 0.11 | Orthogroups_2024-Update | |
Sobic.004G077800.2 | No alias | component *(NRPA3) of RNA polymerase I complex &... | 0.04 | Orthogroups_2024-Update | |
Solyc12g015780 | No alias | DNA-directed RNA polymerase family protein (AHRD V3.3... | 0.05 | Orthogroups_2024-Update | |
Sopen12g007690 | No alias | RNA polymerase Rpb3/RpoA insert domain | 0.1 | Orthogroups_2024-Update | |
evm.model.tig00020848.19 | No alias | (at1g60620 : 348.0) RNA polymerase I subunit 43... | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | 16Dec |
BP | GO:0006351 | transcription, DNA-templated | IEA | 16Dec |
MF | GO:0046983 | protein dimerization activity | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
CC | GO:0005730 | nucleolus | IEP | Predicted GO |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Predicted GO |
CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006353 | DNA-templated transcription, termination | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008565 | protein transporter activity | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
CC | GO:0019867 | outer membrane | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
CC | GO:0030684 | preribosome | IEP | Predicted GO |
CC | GO:0031966 | mitochondrial membrane | IEP | Predicted GO |
CC | GO:0031968 | organelle outer membrane | IEP | Predicted GO |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032977 | membrane insertase activity | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
CC | GO:0098805 | whole membrane | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
MF | GO:2001070 | starch binding | IEP | Predicted GO |
No external refs found! |