1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU1Hr1G058940.3

HORVU1Hr1G058940.3


Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G058940.3
Cluster HCAA Clusters: Cluster_323

Target Alias Description ECC score Gene Family Method Actions
At1g36060 No alias Ethylene-responsive transcription factor ERF055... 0.03 Orthogroups_2024-Update
Bradi4g38932 No alias ethylene-responsive element binding factor 15 0.02 Orthogroups_2024-Update
Brara.A03436.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.01 Orthogroups_2024-Update
Brara.D02156.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.F00821.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.H00929.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.H02645.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.J02251.1 No alias cutin and suberin biosynthesis transcription factor... 0.03 Orthogroups_2024-Update
Brara.K01077.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G137341 No alias C-repeat/DRE binding factor 2 0.02 Orthogroups_2024-Update
GRMZM2G174917 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
GRMZM2G421033 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
GRMZM2G438202 No alias ethylene responsive element binding factor 4 0.02 Orthogroups_2024-Update
Glyma.04G067200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G020900 No alias cytokinin response factor 2 0.02 Orthogroups_2024-Update
Glyma.15G152000 No alias ethylene-responsive element binding protein 0.02 Orthogroups_2024-Update
Glyma.19G262700 No alias related to AP2 2 0.02 Orthogroups_2024-Update
HORVU4Hr1G071890.2 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
HORVU4Hr1G077280.1 No alias Unknown function 0.06 Orthogroups_2024-Update
LOC_Os02g43970 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g20350 No alias ethylene-responsive transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g06770 No alias ethylene-responsive transcription factor ERF110,... 0.02 Orthogroups_2024-Update
MA_4032g0010 No alias (q9sxs8|erf3_tobac : 85.1) Ethylene-responsive... 0.02 Orthogroups_2024-Update
MA_896002g0010 No alias (at5g11590 : 147.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Mp7g00860.1 No alias transcription factor (DREB) 0.02 Orthogroups_2024-Update
PSME_00004892-RA No alias (at1g19210 : 123.0) encodes a member of the DREB... 0.01 Orthogroups_2024-Update
Potri.003G150800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G099900 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G087800 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Pp1s14_196V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s53_80V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s67_144V6 No alias ap2 domain transcription factor 0.02 Orthogroups_2024-Update
Pp1s6_75V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.4G180800.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Seita.6G023800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.7G188500.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G473900.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G442100.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G103100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G259000.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G141500.1 No alias subgroup ERF-II transcription factor *(ERF19/20) 0.02 Orthogroups_2024-Update
Solyc01g095500 No alias Sl Cytokinin Response Factor 5 0.02 Orthogroups_2024-Update
Solyc03g026280 No alias CBF 0.03 Orthogroups_2024-Update
Solyc05g052030 No alias ethylene response factor 4 0.02 Orthogroups_2024-Update
Solyc09g091950 No alias Ethylene-responsive transcription factor ERF062 (AHRD... 0.01 Orthogroups_2024-Update
Sopen00g003270 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen08g030500 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 47 96
No external refs found!