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  5. HORVU1Hr1G059660.2

HORVU1Hr1G059660.2


Description : E3 ubiquitin ligase


Gene families : OG_42_0000370 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G059660.2
Cluster HCAA Clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
420589 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Orthogroups_2024-Update
Brara.F02111.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Cre09.g400738 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 Orthogroups_2024-Update
MA_10433939g0010 No alias (at3g47550 : 264.0) RING/FYVE/PHD zinc finger... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 50 97
IPR022143 DUF3675 103 213
No external refs found!