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  5. HORVU1Hr1G060370.1

HORVU1Hr1G060370.1


Description : platform ATPase CDC48


Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G060370.1
Cluster HCAA Clusters: Cluster_328

Target Alias Description ECC score Gene Family Method Actions
At3g53230 No alias Cell division control protein 48 homolog D... 0.03 Orthogroups_2024-Update
GRMZM2G082131 No alias cell division cycle 48C 0.02 Orthogroups_2024-Update
MA_9824554g0010 No alias (p54774|cdc48_soybn : 416.0) Cell division cycle protein... 0.03 Orthogroups_2024-Update
Seita.9G539900.1 No alias platform ATPase CDC48 0.02 Orthogroups_2024-Update
Sopen03g031660 No alias ATPase family associated with various cellular activities (AAA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004201 Cdc48_dom2 135 198
IPR003959 ATPase_AAA_core 521 654
IPR003959 ATPase_AAA_core 248 377
IPR003338 CDC4_N-term_subdom 33 114
No external refs found!