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  5. HORVU1Hr1G060530.4

HORVU1Hr1G060530.4


Description : nucleoside hydrolase


Gene families : OG_42_0001975 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001975_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G060530.4
Cluster HCAA Clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
A4A49_01771 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At5g18860 No alias AT5g18860/F17K4_110 [Source:UniProtKB/TrEMBL;Acc:Q8RY23] 0.06 Orthogroups_2024-Update
Glyma.13G212900 No alias inosine-uridine preferring nucleoside hydrolase family protein 0.02 Orthogroups_2024-Update
PSME_00015684-RA No alias (at5g18890 : 211.0) Inosine-uridine preferring... 0.07 Orthogroups_2024-Update
Seita.3G245100.1 No alias nucleoside hydrolase 0.03 Orthogroups_2024-Update
Sobic.009G133900.1 No alias nucleoside hydrolase 0.04 Orthogroups_2024-Update
Sopen08g018420 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006382 adenosine to inosine editing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016553 base conversion or substitution editing IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001910 Inosine/uridine_hydrolase_dom 33 343
IPR001910 Inosine/uridine_hydrolase_dom 503 843
No external refs found!