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  5. HORVU1Hr1G062030.1

HORVU1Hr1G062030.1


Description : basic chitinase *(CHIB)


Gene families : OG_42_0000472 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G062030.1

Target Alias Description ECC score Gene Family Method Actions
A4A49_00786 No alias acidic endochitinase q 0.02 Orthogroups_2024-Update
A4A49_31315 No alias endochitinase b 0.03 Orthogroups_2024-Update
HORVU1Hr1G017670.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Mp2g24410.1 No alias Endochitinase CH25 OS=Brassica napus... 0.03 Orthogroups_2024-Update
PSME_00012569-RA No alias (p17514|chiq_tobac : 260.0) Acidic endochitinase Q... 0.02 Orthogroups_2024-Update
PSME_00031474-RA No alias (p17514|chiq_tobac : 250.0) Acidic endochitinase Q... 0.02 Orthogroups_2024-Update
PSME_00050349-RA No alias (p52403|chi1_soltu : 337.0) Endochitinase 1 precursor... 0.03 Orthogroups_2024-Update
Pp1s309_77V6 No alias chitinase 0.02 Orthogroups_2024-Update
Seita.5G033200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G137600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen02g027710 No alias Chitinase class I 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA 16Dec
BP GO:0006032 chitin catabolic process IEA 16Dec
MF GO:0008061 chitin binding IEA 16Dec
BP GO:0016998 cell wall macromolecule catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 89 323
IPR001002 Chitin-bd_1 35 72
No external refs found!