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  5. HORVU1Hr1G063300.1

HORVU1Hr1G063300.1


Description : Ran-activating protein of nucleocytoplasmic transport


Gene families : OG_42_0001506 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G063300.1
Cluster HCAA Clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
Seita.5G145400.1 No alias Ran-activating protein of nucleocytoplasmic transport 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR025265 WPP_dom 15 108
IPR001611 Leu-rich_rpt 412 433
IPR001611 Leu-rich_rpt 217 235
IPR001611 Leu-rich_rpt 325 348
No external refs found!