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Description : RNA editing factor *(MEF32)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU1Hr1G063370.1 | |
| Cluster | HCAA Clusters: Cluster_183 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g31430 | No alias | Pentatricopeptide repeat-containing protein At1g31430... | 0.03 | Orthogroups_2024-Update | |
| At1g77170 | No alias | Pentatricopeptide repeat-containing protein At1g77170,... | 0.03 | Orthogroups_2024-Update | |
| At2g03880 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.02 | Orthogroups_2024-Update | |
| At3g49170 | No alias | Pentatricopeptide repeat-containing protein At3g49170,... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g72290 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g50980 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Brara.A02436.1 | No alias | RNA editing factor *(CRR2) | 0.04 | Orthogroups_2024-Update | |
| Brara.G01460.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
| Brara.G03498.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G161368 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.02G160400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.13G313300 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G063300.4 | No alias | RNA editing factor *(ELI1) | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G061610.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G047290.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os03g62690 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os05g30710 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os12g36620 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_462184g0010 | No alias | (at4g13650 : 568.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| MA_68084g0010 | No alias | (at1g11290 : 535.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
| PSME_00001463-RA | No alias | (at4g33170 : 587.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00056153-RA | No alias | (at2g13600 : 519.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| Potri.006G181800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.016G128900 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Seita.1G205700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.1G290500.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.4G225800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G290400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.006G146900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.008G009000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Solyc01g081110 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc03g114660 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc10g007940 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Solyc11g064750 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00001038.5 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000725 | recombinational repair | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003729 | mRNA binding | IEP | Predicted GO |
| BP | GO:0006310 | DNA recombination | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
| CC | GO:0035145 | exon-exon junction complex | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| MF | GO:0046422 | violaxanthin de-epoxidase activity | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
| No external refs found! |