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  5. HORVU1Hr1G066050.1

HORVU1Hr1G066050.1


Description : cyclic nucleotide-gated cation channel *(CNGC)


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G066050.1
Cluster HCAA Clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
At2g46440 No alias Cyclic nucleotide-gated ion channel 11... 0.02 Orthogroups_2024-Update
Bradi2g57697 No alias cyclic nucleotide-gated channel 18 0.02 Orthogroups_2024-Update
Brara.D01434.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Glyma.12G219000 No alias cyclic nucleotide-gated cation channel 4 0.03 Orthogroups_2024-Update
Seita.8G055000.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA 16Dec
BP GO:0006811 ion transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 180 416
IPR000595 cNMP-bd_dom 511 597
No external refs found!