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  5. At2g43570

At2g43570


Description : CHI [Source:UniProtKB/TrEMBL;Acc:A0A178W3M3]


Gene families : OG_42_0000525 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g43570
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
426710 No alias Chitinase family protein 0.02 Orthogroups_2024-Update
Bradi5g14430 No alias homolog of carrot EP3-3 chitinase 0.05 Orthogroups_2024-Update
MA_10430424g0010 No alias (p29022|chia_maize : 207.0) Endochitinase A precursor... 0.04 Orthogroups_2024-Update
MA_191308g0010 No alias (at3g54420 : 235.0) encodes an EP3 chitinase that is... 0.04 Orthogroups_2024-Update
MA_295712g0010 No alias (at3g54420 : 239.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
MA_36141g0010 No alias (at3g54420 : 245.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
MA_5029466g0010 No alias (at2g43590 : 86.3) Chitinase family protein; FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00019563-RA No alias (at3g54420 : 211.0) encodes an EP3 chitinase that is... 0.05 Orthogroups_2024-Update
PSME_00029190-RA No alias (p29022|chia_maize : 256.0) Endochitinase A precursor... 0.05 Orthogroups_2024-Update
PSME_00029419-RA No alias (at3g54420 : 244.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
PSME_00037516-RA No alias (at3g54420 : 211.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
PSME_00039570-RA No alias (p29023|chib_maize : 253.0) Endochitinase B precursor... 0.02 Orthogroups_2024-Update
PSME_00046774-RA No alias (at3g54420 : 162.0) encodes an EP3 chitinase that is... 0.05 Orthogroups_2024-Update
PSME_00050706-RA No alias (p29022|chia_maize : 237.0) Endochitinase A precursor... 0.03 Orthogroups_2024-Update
PSME_00050767-RA No alias (p29022|chia_maize : 240.0) Endochitinase A precursor... 0.03 Orthogroups_2024-Update
PSME_00051412-RA No alias (at3g54420 : 249.0) encodes an EP3 chitinase that is... 0.02 Orthogroups_2024-Update
Pp1s287_72V6 No alias secreted chitinase 0.03 Orthogroups_2024-Update
Seita.7G150500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G132400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G132500.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan predictions
BP GO:0006032 chitin catabolic process IEA InterProScan predictions
MF GO:0008061 chitin binding IEA InterProScan predictions
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 33 64
IPR000726 Glyco_hydro_19_cat 229 277
IPR000726 Glyco_hydro_19_cat 81 224
No external refs found!