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  5. HORVU1Hr1G075860.1

HORVU1Hr1G075860.1


Description : pectin methylesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G075860.1
Cluster HCAA Clusters: Cluster_327

Target Alias Description ECC score Gene Family Method Actions
A4A49_15905 No alias putative pectinesterase 8 0.03 Orthogroups_2024-Update
Bradi1g21810 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g17880 No alias Pectin lyase-like superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G070913 No alias pectinesterase 11 0.03 Orthogroups_2024-Update
Glyma.01G068100 No alias Pectin lyase-like superfamily protein 0.01 Orthogroups_2024-Update
Glyma.02G294700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G125100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G113700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G028810.4 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
LOC_Os09g39760 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g26680 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
MA_10428610g0010 No alias (at5g19730 : 471.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Potri.012G115200 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s175_19V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s23_141V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s341_66V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s461_15V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.3G174200.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.5G313900.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Solyc10g083810 No alias No description available 0.03 Orthogroups_2024-Update
Sopen07g033560 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA 16Dec
BP GO:0042545 cell wall modification IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 116 403
No external refs found!