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  5. HORVU1Hr1G078530.3

HORVU1Hr1G078530.3


Description : histone *(H2B)


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G078530.3
Cluster HCAA Clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
At3g45980 No alias Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178V9F6] 0.03 Orthogroups_2024-Update
Cre06.g275800 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g276550 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g709150 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g710450 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g711750 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G056530.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
LOC_Os01g05630 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.02 Orthogroups_2024-Update
PSME_00037687-RA No alias (at3g45980 : 174.0) Encodes a histone 2B (H2B) protein.... 0.03 Orthogroups_2024-Update
Sobic.007G221800.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 43 156
No external refs found!