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  5. HORVU1Hr1G079130.2

HORVU1Hr1G079130.2


Description : EC_3.2 glycosylase


Gene families : OG_42_0000306 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000306_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G079130.2
Cluster HCAA Clusters: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
Brara.G02971.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Glyma.14G044200 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.U005701 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.2G346300.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Seita.3G162000.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Solyc12g009420 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G57510.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 64 398
No external refs found!