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At2g43880


Description : Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SLM8]


Gene families : OG_42_0000668 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g43880
Cluster HCCA clusters: Cluster_217 Predicted GO

Target Alias Description ECC score Gene Family Method Actions
At1g65570 No alias F5I14.10 [Source:UniProtKB/TrEMBL;Acc:O04474] 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 58 384
No external refs found!