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  5. HORVU1Hr1G080950.5

HORVU1Hr1G080950.5


Description : starch synthase *(SS4)


Gene families : OG_42_0001050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001050_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G080950.5
Cluster HCAA Clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Bradi2g18810 No alias starch synthase 4 0.02 Orthogroups_2024-Update
Cre16.g663850 No alias starch synthase 4 0.02 Orthogroups_2024-Update
GRMZM2G121612 No alias starch synthase 3 0.03 Orthogroups_2024-Update
Glyma.15G108000 No alias starch synthase 3 0.03 Orthogroups_2024-Update
Kfl00004_0550 kfl00004_0550_v1.1 (at4g18240 : 457.0) starch synthase 4 (SS4); FUNCTIONS... 0.02 Orthogroups_2024-Update
Kfl00604_0020 kfl00604_0020_v1.1 (q43846|ssy3_soltu : 815.0) Soluble starch synthase 3,... 0.01 Orthogroups_2024-Update
LOC_Os04g53310 No alias soluble starch synthase 3, chloroplast precursor,... 0.04 Orthogroups_2024-Update
Mp2g08030.1 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 Orthogroups_2024-Update
Mp2g20000.1 No alias starch synthase (SSIII) 0.03 Orthogroups_2024-Update
Potri.001G351800 No alias starch synthase 4 0.03 Orthogroups_2024-Update
Seita.7G243900.1 No alias starch synthase *(SS3) 0.05 Orthogroups_2024-Update
Sobic.006G221000.1 No alias starch synthase *(SS3) 0.05 Orthogroups_2024-Update
evm.model.tig00020746.8 No alias (at4g18240 : 154.0) starch synthase 4 (SS4); FUNCTIONS... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016757 transferase activity, transferring glycosyl groups IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008987 quinolinate synthetase A activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
BP GO:0016126 sterol biosynthetic process IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 464 702
IPR001296 Glyco_trans_1 759 920
No external refs found!