HORVU1Hr1G082670.6

Description : RAV/NGATHA-type transcription factor & AP2-RAV-type transcription factor *(EDF)

Gene families : OG_42_0000305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU1Hr1G082670.6
Cluster	HCAA Clusters: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g02720	No alias	related to ABI3/VP1 2	0.02	Orthogroups_2024-Update
Bradi2g17610	No alias	ethylene response DNA binding factor 3	0.02	Orthogroups_2024-Update
Brara.A03401.1	No alias	RAV/NGATHA-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B03202.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.02	Orthogroups_2024-Update
Brara.C03374.1	No alias	RAV/NGATHA-type transcription factor	0.05	Orthogroups_2024-Update
Brara.E00098.1	No alias	RAV/NGATHA-type transcription factor	0.02	Orthogroups_2024-Update
Brara.E00866.1	No alias	RAV/NGATHA-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F00801.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.03	Orthogroups_2024-Update
Brara.J00079.1	No alias	RAV/NGATHA-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.01G087500	No alias	AP2/B3 transcription factor family protein	0.05	Orthogroups_2024-Update
Glyma.02G099500	No alias	AP2/B3 transcription factor family protein	0.05	Orthogroups_2024-Update
Glyma.07G048200	No alias	AP2/B3-like transcriptional factor family protein	0.03	Orthogroups_2024-Update
Glyma.10G076100	No alias	AP2/B3-like transcriptional factor family protein	0.02	Orthogroups_2024-Update
Glyma.10G204400	No alias	AP2/B3 transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.19G196600	No alias	AP2/B3-like transcriptional factor family protein	0.03	Orthogroups_2024-Update
HORVU3Hr1G010190.5	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.03	Orthogroups_2024-Update
HORVU3Hr1G064640.4	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.03	Orthogroups_2024-Update
LOC_Os01g04800	No alias	B3 DNA binding domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_10433425g0010	No alias	(at1g25560 : 91.3) Encodes a member of the RAV...	0.04	Orthogroups_2024-Update
MA_178646g0010	No alias	(at1g68840 : 271.0) Rav2 is part of a complex that has...	0.04	Orthogroups_2024-Update
MA_246350g0010	No alias	(at1g13260 : 168.0) Encodes an AP2/B3 domain...	0.03	Orthogroups_2024-Update
PSME_00021294-RA	No alias	(at1g13260 : 294.0) Encodes an AP2/B3 domain...	0.04	Orthogroups_2024-Update
PSME_00035556-RA	No alias	(at3g25730 : 293.0) ethylene response DNA binding factor...	0.02	Orthogroups_2024-Update
Potri.006G208100	No alias	AP2/B3-like transcriptional factor family protein	0.03	Orthogroups_2024-Update
Potri.010G129200	No alias	AP2/B3 transcription factor family protein	0.03	Orthogroups_2024-Update
Seita.1G273900.1	No alias	RAV/NGATHA-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G280700.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.06	Orthogroups_2024-Update
Seita.6G064600.1	No alias	RAV/NGATHA-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G078100.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.02	Orthogroups_2024-Update
Sobic.005G041400.2	No alias	RAV/NGATHA-type transcription factor	0.03	Orthogroups_2024-Update
Sopen04g002090	No alias	B3 DNA binding domain	0.02	Orthogroups_2024-Update
Sopen05g005620	No alias	B3 DNA binding domain	0.02	Orthogroups_2024-Update
Sopen08g004540	No alias	B3 DNA binding domain	0.03	Orthogroups_2024-Update
Sopen10g032690	No alias	B3 DNA binding domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
MF	GO:0008131	primary amine oxidase activity	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Predicted GO
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	202	302
IPR001471	AP2/ERF_dom	65	113

External Links

No external refs found!

HORVU1Hr1G082670.6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation