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  5. HORVU1Hr1G083680.1

HORVU1Hr1G083680.1


Description : Unknown function


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G083680.1
Cluster HCAA Clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
51483 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
99677 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
A4A49_11989 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.03 Orthogroups_2024-Update
A4A49_32855 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.03 Orthogroups_2024-Update
At1g03510 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Orthogroups_2024-Update
At2g34400 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.06 Orthogroups_2024-Update
At3g15130 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Orthogroups_2024-Update
At5g39680 No alias Pentatricopeptide repeat-containing protein At5g39680... 0.04 Orthogroups_2024-Update
Bradi1g27320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g57730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g38420 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Brara.B00112.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E01323.1 No alias RNA editing factor *(OTP81) 0.03 Orthogroups_2024-Update
Brara.F01301.1 No alias RNA editing factor *(OTP970) 0.02 Orthogroups_2024-Update
Brara.F03378.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G01460.1 No alias Unknown function 0.05 Orthogroups_2024-Update
GRMZM2G076257 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G168170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G462417 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G286300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G277600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G008800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G091951 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G053030.5 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G092840.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G009150.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G113840.2 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G038460.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os05g36350 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g24640 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
MA_183278g0010 No alias (at3g12770 : 619.0) Encodes a pentatricopeptide repeat... 0.04 Orthogroups_2024-Update
MA_99849g0020 No alias (at4g02750 : 535.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00005130-RA No alias (at4g33990 : 552.0) embryo defective 2758 (EMB2758);... 0.02 Orthogroups_2024-Update
PSME_00005325-RA No alias (at3g13770 : 417.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00011210-RA No alias (at1g15510 : 705.0) Encodes a pentatricopeptide repeat... 0.03 Orthogroups_2024-Update
PSME_00014659-RA No alias (at1g11290 : 712.0) Pentatricopeptide Repeat Protein... 0.04 Orthogroups_2024-Update
PSME_00024580-RA No alias (at4g02750 : 440.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00034399-RA No alias (at4g33170 : 426.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00036148-RA No alias (at2g22070 : 583.0) pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
Potri.002G175900 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G041200 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.014G087100 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Sobic.001G161100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G513000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G384800.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.002G403500.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc06g084580 No alias Pentatricopeptide repeat-containing protein family (AHRD... 0.03 Orthogroups_2024-Update
Solyc08g076150 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen01g054250 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen09g027460 No alias PPR repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 243 270
IPR002885 Pentatricopeptide_repeat 420 445
IPR002885 Pentatricopeptide_repeat 36 83
IPR002885 Pentatricopeptide_repeat 140 188
IPR002885 Pentatricopeptide_repeat 346 392
No external refs found!