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  5. HORVU1Hr1G087740.1

HORVU1Hr1G087740.1


Description : LHC-related protein *(ELIP)


Gene families : OG_42_0000421 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G087740.1
Cluster HCAA Clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
A4A49_24316 No alias early light-induced protein 1, chloroplastic 0.04 Orthogroups_2024-Update
A4A49_27530 No alias early light-induced protein 1, chloroplastic 0.05 Orthogroups_2024-Update
Bradi1g55560 No alias Chlorophyll A-B binding family protein 0.07 Orthogroups_2024-Update
Bradi1g55570 No alias Chlorophyll A-B binding family protein 0.06 Orthogroups_2024-Update
Bradi1g55600 No alias Chlorophyll A-B binding family protein 0.05 Orthogroups_2024-Update
Bradi1g55610 No alias Chlorophyll A-B binding family protein 0.07 Orthogroups_2024-Update
Bradi1g55620 No alias Chlorophyll A-B binding family protein 0.07 Orthogroups_2024-Update
Brara.A02052.1 No alias LHC-related protein *(ELIP) 0.04 Orthogroups_2024-Update
Brara.A02698.1 No alias LHC-related protein *(ELIP) 0.04 Orthogroups_2024-Update
Brara.C03891.1 No alias LHC-related protein *(ELIP) 0.03 Orthogroups_2024-Update
Cre08.g384650 No alias Chlorophyll A-B binding family protein 0.01 Orthogroups_2024-Update
Cre16.g679250 No alias Chlorophyll A-B binding family protein 0.02 Orthogroups_2024-Update
Glyma.10G243800 No alias Chlorophyll A-B binding family protein 0.07 Orthogroups_2024-Update
Glyma.20G150600 No alias Chlorophyll A-B binding family protein 0.06 Orthogroups_2024-Update
Kfl00110_0040 kfl00110_0040_v1.1 (at3g22840 : 99.4) Encodes an early light-inducible... 0.02 Orthogroups_2024-Update
MA_10058549g0010 No alias (at3g22840 : 143.0) Encodes an early light-inducible... 0.03 Orthogroups_2024-Update
MA_10432802g0010 No alias (p11432|eli_pea : 172.0) Early light-induced protein,... 0.03 Orthogroups_2024-Update
MA_183315g0010 No alias (p11432|eli_pea : 138.0) Early light-induced protein,... 0.04 Orthogroups_2024-Update
Mp6g14520.1 No alias ELIP LHC-related protein 0.03 Orthogroups_2024-Update
PSME_00007991-RA No alias (at3g22840 : 146.0) Encodes an early light-inducible... 0.03 Orthogroups_2024-Update
Pp1s78_96V6 No alias elip1.8 gene for putative early light-induced protein ELIP1.8 0.01 Orthogroups_2024-Update
Seita.2G053300.1 No alias LHC-related protein *(ELIP) 0.07 Orthogroups_2024-Update
Seita.2G053700.1 No alias LHC-related protein *(ELIP) 0.06 Orthogroups_2024-Update
Seita.2G053800.1 No alias LHC-related protein *(ELIP) 0.07 Orthogroups_2024-Update
Sobic.002G052000.2 No alias LHC-related protein *(ELIP) 0.06 Orthogroups_2024-Update
Sobic.002G052100.1 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
Solyc09g082690 No alias superoxide dismutase 0.04 Orthogroups_2024-Update
Sopen09g031560 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009060 aerobic respiration IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0045333 cellular respiration IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 7 99
No external refs found!