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  5. HORVU1Hr1G090100.1

HORVU1Hr1G090100.1


Description : plastidial RNA basal splicing factor *(WTF1)


Gene families : OG_42_0004417 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004417_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G090100.1
Cluster HCAA Clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Bradi2g15890 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.06 Orthogroups_2024-Update
Glyma.03G002600 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.03 Orthogroups_2024-Update
Potri.002G169300 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.04 Orthogroups_2024-Update
Potri.014G096801 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.03 Orthogroups_2024-Update
Seita.3G139500.1 No alias plastidial RNA basal splicing factor *(WTF1) 0.04 Orthogroups_2024-Update
Sobic.009G238100.2 No alias plastidial RNA basal splicing factor *(WTF1) 0.03 Orthogroups_2024-Update
Sopen01g039420 No alias Plant organelle RNA recognition domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR021099 PORR_domain 65 393
No external refs found!