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  5. HORVU1Hr1G092270.7

HORVU1Hr1G092270.7


Description : Unknown function


Gene families : OG_42_0001612 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G092270.7
Cluster HCAA Clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
Bradi2g15390 No alias Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0.05 Orthogroups_2024-Update
Bradi4g25047 No alias Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0.06 Orthogroups_2024-Update
Glyma.07G208600 No alias Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0.03 Orthogroups_2024-Update
Potri.001G183100 No alias Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0.03 Orthogroups_2024-Update
Potri.004G146600 No alias Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0051011 microtubule minus-end binding IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003114 Phox_assoc 113 290
IPR001683 Phox 718 795
IPR013937 Sorting_nexin_C 961 1091
No external refs found!