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  5. HORVU2Hr1G003350.1

HORVU2Hr1G003350.1


Description : formamidopyrimidine-DNA glycosylase *(FPG1)


Gene families : OG_42_0004977 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004977_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G003350.1
Cluster HCAA Clusters: Cluster_4


Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA 16Dec
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEA 16Dec
BP GO:0006284 base-excision repair IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEA 16Dec
MF GO:0019104 DNA N-glycosylase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR015886 DNA_glyclase/AP_lyase_DNA-bd 163 252
IPR012319 FPG_cat 73 148
No external refs found!