HORVU2Hr1G010870.8

Description : component *(eS6) of small ribosomal-subunit (SSU) proteome

Gene families : OG_42_0001972 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001972_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU2Hr1G010870.8
Cluster	HCAA Clusters: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
172795	No alias	Ribosomal protein S6e	0.14	Orthogroups_2024-Update
A4A49_38773	No alias	40s ribosomal protein s6-2	0.05	Orthogroups_2024-Update
A4A49_58422	No alias	40s ribosomal protein s6-1	0.13	Orthogroups_2024-Update
A4A49_61057	No alias	40s ribosomal protein s6-1	0.12	Orthogroups_2024-Update
At4g31700	No alias	40S ribosomal protein S6-1...	0.03	Orthogroups_2024-Update
Bradi1g21320	No alias	Ribosomal protein S6e	0.06	Orthogroups_2024-Update
Bradi1g60730	No alias	Ribosomal protein S6e	0.12	Orthogroups_2024-Update
Brara.A00605.1	No alias	component *(eS6) of small ribosomal-subunit (SSU) proteome	0.16	Orthogroups_2024-Update
Brara.C00414.1	No alias	component *(eS6) of small ribosomal-subunit (SSU) proteome	0.12	Orthogroups_2024-Update
Brara.H01340.1	No alias	component *(eS6) of small ribosomal-subunit (SSU) proteome	0.12	Orthogroups_2024-Update
Brara.J02318.1	No alias	component *(eS6) of small ribosomal-subunit (SSU) proteome	0.12	Orthogroups_2024-Update
Cre09.g400650	No alias	Ribosomal protein S6e	0.06	Orthogroups_2024-Update
GRMZM2G054136	No alias	Ribosomal protein S6e	0.04	Orthogroups_2024-Update
GRMZM5G851698	No alias	Ribosomal protein S6e	0.07	Orthogroups_2024-Update
Glyma.07G198600	No alias	Ribosomal protein S6e	0.14	Orthogroups_2024-Update
Glyma.08G343800	No alias	Ribosomal protein S6e	0.07	Orthogroups_2024-Update
Glyma.13G177800	No alias	Ribosomal protein S6e	0.1	Orthogroups_2024-Update
Glyma.13G237800	No alias	Ribosomal protein S6e	0.06	Orthogroups_2024-Update
Glyma.15G075600	No alias	Ribosomal protein S6e	0.08	Orthogroups_2024-Update
Glyma.18G151800	No alias	Ribosomal protein S6e	0.04	Orthogroups_2024-Update
Kfl00053_0450	kfl00053_0450_v1.1	(q9m3v8\|rs6_aspof : 374.0) 40S ribosomal protein S6 -...	0.09	Orthogroups_2024-Update
LOC_Os03g27260	No alias	40S ribosomal protein S6, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os07g42950	No alias	40S ribosomal protein S6, putative, expressed	0.03	Orthogroups_2024-Update
MA_10426804g0010	No alias	(q9m3v8\|rs6_aspof : 406.0) 40S ribosomal protein S6 -...	0.06	Orthogroups_2024-Update
MA_72828g0010	No alias	(q9m3v8\|rs6_aspof : 368.0) 40S ribosomal protein S6 -...	0.05	Orthogroups_2024-Update
Mp4g01750.1	No alias	component RPS6 of SSU proteome	0.08	Orthogroups_2024-Update
PSME_00020471-RA	No alias	(q9m3v8\|rs6_aspof : 393.0) 40S ribosomal protein S6 -...	0.03	Orthogroups_2024-Update
Potri.005G072700	No alias	Ribosomal protein S6e	0.05	Orthogroups_2024-Update
Potri.005G162600	No alias	Ribosomal protein S6e	0.05	Orthogroups_2024-Update
Potri.007G096300	No alias	Ribosomal protein S6e	0.07	Orthogroups_2024-Update
Pp1s253_7V6	No alias	40S ribosomal protein S6 [Asparagus officinalis]	0.13	Orthogroups_2024-Update
Pp1s311_33V6	No alias	40S ribosomal protein S6 [Asparagus officinalis]	0.07	Orthogroups_2024-Update
Seita.2G394600.1	No alias	component *(eS6) of small ribosomal-subunit (SSU) proteome	0.13	Orthogroups_2024-Update
Seita.3G362000.1	No alias	component *(eS6) of small ribosomal-subunit (SSU) proteome	0.15	Orthogroups_2024-Update
Sobic.002G379500.3	No alias	component *(eS6) of small ribosomal-subunit (SSU) proteome	0.14	Orthogroups_2024-Update
Sobic.008G098800.1	No alias	component *(eS6) of small ribosomal-subunit (SSU) proteome	0.18	Orthogroups_2024-Update
Solyc08g006040	No alias	40S ribosomal protein S6 (AHRD V3.3 *** K4CI93_SOLLC)	0.16	Orthogroups_2024-Update
Solyc08g074240	No alias	40S ribosomal protein S6 (AHRD V3.3 *** K4CME5_SOLLC)	0.15	Orthogroups_2024-Update
Solyc12g096300	No alias	40S ribosomal protein S6 (AHRD V3.3 *** K4DHA3_SOLLC)	0.16	Orthogroups_2024-Update
Sopen08g002010	No alias	Ribosomal protein S6e	0.17	Orthogroups_2024-Update
Sopen08g022890	No alias	Ribosomal protein S6e	0.16	Orthogroups_2024-Update
Sopen12g032160	No alias	Ribosomal protein S6e	0.22	Orthogroups_2024-Update
evm.model.contig_441.13	No alias	(q9m3v8\|rs6_aspof : 246.0) 40S ribosomal protein S6 -...	0.18	Orthogroups_2024-Update
evm.model.tig00000704.73	No alias	(at5g10360 : 214.0) RPS6A and RPS6B are fully redundant...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003697	single-stranded DNA binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003729	mRNA binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0004018	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	IEP	Predicted GO
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Predicted GO
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predicted GO
CC	GO:0005849	mRNA cleavage factor complex	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006188	IMP biosynthetic process	IEP	Predicted GO
BP	GO:0006378	mRNA polyadenylation	IEP	Predicted GO
BP	GO:0006399	tRNA metabolic process	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predicted GO
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	IEP	Predicted GO
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
MF	GO:0016597	amino acid binding	IEP	Predicted GO
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Predicted GO
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	IEP	Predicted GO
MF	GO:0016842	amidine-lyase activity	IEP	Predicted GO
MF	GO:0016874	ligase activity	IEP	Predicted GO
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predicted GO
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
BP	GO:0031123	RNA 3'-end processing	IEP	Predicted GO
BP	GO:0031124	mRNA 3'-end processing	IEP	Predicted GO
MF	GO:0031406	carboxylic acid binding	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0043038	amino acid activation	IEP	Predicted GO
BP	GO:0043039	tRNA aminoacylation	IEP	Predicted GO
MF	GO:0043177	organic acid binding	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
BP	GO:0043631	RNA polyadenylation	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
BP	GO:0046040	IMP metabolic process	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
BP	GO:0048193	Golgi vesicle transport	IEP	Predicted GO
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predicted GO
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001377	Ribosomal_S6e	34	161

External Links

No external refs found!

HORVU2Hr1G010870.8

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation