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  5. HORVU2Hr1G012790.1

HORVU2Hr1G012790.1


Description : transketolase & transketolase & EC_2.2 transferase transferring aldehyde or ketonic group


Gene families : OG_42_0002327 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002327_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G012790.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Mp8g07830.2 No alias transketolase. transketolase 0.02 Orthogroups_2024-Update
Potri.014G068200 No alias Transketolase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 452 622
IPR005474 Transketolase_N 103 434
IPR033248 Transketolase_C 647 752
No external refs found!