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  5. HORVU2Hr1G015430.1

HORVU2Hr1G015430.1


Description : D-alanine


Gene families : OG_42_0005768 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005768_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G015430.1
Cluster HCAA Clusters: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G142437 No alias D-alanine--D-alanine ligase family 0.03 Orthogroups_2024-Update
Solyc10g085400 No alias D-alanine-D-alanine ligase family (AHRD V3.3 *** AT3G08840.2) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008716 D-alanine-D-alanine ligase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
InterPro domains Description Start Stop
IPR011095 Dala_Dala_lig_C 208 346
IPR011095 Dala_Dala_lig_C 772 877
IPR011127 Dala_Dala_lig_N 452 620
IPR011127 Dala_Dala_lig_N 110 151
No external refs found!