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Description : component *(eL19) of large ribosomal-subunit (LSU) proteome
Gene families : OG_42_0001643 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001643_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU2Hr1G018700.1 | |
| Cluster | HCAA Clusters: Cluster_40 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 271656 | No alias | Ribosomal protein L19e family protein | 0.08 | Orthogroups_2024-Update | |
| A4A49_58465 | No alias | 60s ribosomal protein l19-2 | 0.08 | Orthogroups_2024-Update | |
| Bradi1g17920 | No alias | Ribosomal protein L19e family protein | 0.09 | Orthogroups_2024-Update | |
| Bradi1g63010 | No alias | Ribosomal protein L19e family protein | 0.06 | Orthogroups_2024-Update | |
| Brara.I00133.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
| Brara.I05560.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
| Brara.J00128.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
| Cre02.g075700 | No alias | Ribosomal protein L19e family protein | 0.09 | Orthogroups_2024-Update | |
| GRMZM2G116135 | No alias | Ribosomal protein L19e family protein | 0.02 | Orthogroups_2024-Update | |
| Kfl00915_0030 | kfl00915_0030_v1.1 | (at1g02780 : 290.0) embryo defective 2386 (emb2386);... | 0.03 | Orthogroups_2024-Update | |
| MA_1839g0010 | No alias | (at1g02780 : 287.0) embryo defective 2386 (emb2386);... | 0.04 | Orthogroups_2024-Update | |
| MA_22977g0010 | No alias | (at1g02780 : 282.0) embryo defective 2386 (emb2386);... | 0.09 | Orthogroups_2024-Update | |
| Mp7g09050.1 | No alias | component RPL19 of LSU proteome component | 0.08 | Orthogroups_2024-Update | |
| PSME_00037660-RA | No alias | (at1g02780 : 269.0) embryo defective 2386 (emb2386);... | 0.03 | Orthogroups_2024-Update | |
| PSME_00044681-RA | No alias | (at3g16780 : 285.0) Ribosomal protein L19e family... | 0.06 | Orthogroups_2024-Update | |
| Potri.004G078000 | No alias | Ribosomal protein L19e family protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s121_144V6 | No alias | 60s ribosomal protein | 0.1 | Orthogroups_2024-Update | |
| Pp1s144_37V6 | No alias | ribosomal protein l19 | 0.08 | Orthogroups_2024-Update | |
| Pp1s235_118V6 | No alias | 60s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
| Pp1s302_25V6 | No alias | ribosomal protein l19 | 0.04 | Orthogroups_2024-Update | |
| Pp1s3_375V6 | No alias | 60s ribosomal protein l19-3 | 0.05 | Orthogroups_2024-Update | |
| Pp1s50_102V6 | No alias | 60s ribosomal protein l19-3 | 0.05 | Orthogroups_2024-Update | |
| Pp1s83_173V6 | No alias | 60s ribosomal protein | 0.03 | Orthogroups_2024-Update | |
| Seita.4G043900.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
| Sobic.004G045300.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
| Sobic.010G069400.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
| Solyc06g009210 | No alias | Ribosomal protein L19 (AHRD V3.3 *** K4C3V1_SOLLC) | 0.04 | Orthogroups_2024-Update | |
| Solyc09g075430 | No alias | Ribosomal protein L19 (AHRD V3.3 *** K4CVC0_SOLLC) | 0.04 | Orthogroups_2024-Update | |
| Sopen06g003980 | No alias | Ribosomal protein L19e | 0.04 | Orthogroups_2024-Update | |
| Sopen09g030210 | No alias | Ribosomal protein L19e | 0.06 | Orthogroups_2024-Update | |
| evm.model.contig_735.3 | No alias | (at3g16780 : 205.0) Ribosomal protein L19e family... | 0.05 | Orthogroups_2024-Update | |
| evm.model.tig00021181.1 | No alias | (at1g02780 : 206.0) embryo defective 2386 (emb2386);... | 0.06 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
| CC | GO:0005840 | ribosome | IEA | 16Dec |
| BP | GO:0006412 | translation | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
| MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
| MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | Predicted GO |
| MF | GO:0005525 | GTP binding | IEP | Predicted GO |
| CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
| CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
| BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Predicted GO |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | Predicted GO |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
| BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
| MF | GO:0042393 | histone binding | IEP | Predicted GO |
| MF | GO:0043130 | ubiquitin binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000196 | Ribosomal_L19/L19e | 4 | 145 |
| No external refs found! |