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  5. HORVU2Hr1G022590.1

HORVU2Hr1G022590.1


Description : E3 ubiquitin ligase *(SINA)


Gene families : OG_42_0000730 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000730_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G022590.1
Cluster HCAA Clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
97849 No alias Protein with RING/U-box and TRAF-like domains 0.04 Orthogroups_2024-Update
A4A49_14271 No alias e3 ubiquitin-protein ligase sinat3 0.02 Orthogroups_2024-Update
HORVU6Hr1G016120.11 No alias E3 ubiquitin ligase *(SINA) 0.02 Orthogroups_2024-Update
Sobic.004G027000.2 No alias E3 ubiquitin ligase *(SINA) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA 16Dec
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA 16Dec
BP GO:0007275 multicellular organism development IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 173 372
No external refs found!