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Description : Unknown function
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU2Hr1G027440.18 | |
| Cluster | HCAA Clusters: Cluster_171 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 125444 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| At2g42920 | No alias | Pentatricopeptide repeat-containing protein At2g42920,... | 0.03 | Orthogroups_2024-Update | |
| Bradi2g09441 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi2g37360 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.A02032.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.E02152.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Brara.I04699.1 | No alias | RNA editing factor *(MEF21) | 0.02 | Orthogroups_2024-Update | |
| Glyma.08G208902 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.13G150300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.13G240000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.15G084700 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.16G049100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.16G161800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G029200.4 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G124480.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU4Hr1G014730.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| MA_385322g0010 | No alias | (at1g08070 : 385.0) Encodes a chloroplast RNA editing... | 0.02 | Orthogroups_2024-Update | |
| MA_653417g0010 | No alias | (at4g13650 : 731.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00000162-RA | No alias | (at2g27610 : 616.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00005432-RA | No alias | (at1g11290 : 677.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
| PSME_00007652-RA | No alias | (at1g11290 : 614.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
| PSME_00009010-RA | No alias | (at4g13650 : 679.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00011207-RA | No alias | (at3g63370 : 641.0) Encodes a chloroplast RNA editing... | 0.02 | Orthogroups_2024-Update | |
| PSME_00016248-RA | No alias | (at3g12770 : 631.0) Encodes a pentatricopeptide repeat... | 0.02 | Orthogroups_2024-Update | |
| PSME_00024179-RA | No alias | (at1g11290 : 254.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
| PSME_00046650-RA | No alias | (at4g21300 : 573.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| PSME_00056368-RA | No alias | (at1g11290 : 697.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00057046-RA | No alias | (at4g18750 : 592.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| Potri.003G006800 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | Orthogroups_2024-Update | |
| Potri.013G006700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s446_7V6 | No alias | F18A5.40; pentatricopeptide (PPR) repeat-containing... | 0.03 | Orthogroups_2024-Update | |
| Seita.3G224300.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
| Seita.4G216600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.9G489500.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Solyc01g095160 | No alias | Pentatricopeptide repeat (PPR) superfamily protein (AHRD... | 0.02 | Orthogroups_2024-Update | |
| Sopen01g032860 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen04g022860 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen06g035950 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
| BP | GO:0006281 | DNA repair | IEP | Predicted GO |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
| BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
| BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 3 | 27 |
| IPR002885 | Pentatricopeptide_repeat | 135 | 165 |
| IPR002885 | Pentatricopeptide_repeat | 208 | 228 |
| IPR002885 | Pentatricopeptide_repeat | 510 | 535 |
| IPR002885 | Pentatricopeptide_repeat | 408 | 435 |
| IPR002885 | Pentatricopeptide_repeat | 108 | 134 |
| IPR002885 | Pentatricopeptide_repeat | 30 | 58 |
| IPR002885 | Pentatricopeptide_repeat | 337 | 367 |
| IPR002885 | Pentatricopeptide_repeat | 436 | 482 |
| IPR002885 | Pentatricopeptide_repeat | 233 | 277 |
| No external refs found! |