HORVU2Hr1G029110.2

Description : REM-type transcription factor

Gene families : OG_42_0001074 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001074_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU2Hr1G029110.2
Cluster	HCAA Clusters: Cluster_259

Target	Alias	Description	ECC score	Gene Family Method
412738	No alias	AP2/B3-like transcriptional factor family protein	0.02	Orthogroups_2024-Update
Mp2g08790.1	No alias	transcription factor (REM)	0.03	Orthogroups_2024-Update
Pp1s167_8V6	No alias	dna binding	0.02	Orthogroups_2024-Update
Pp1s170_63V6	No alias	dna binding	0.03	Orthogroups_2024-Update
Sobic.003G203800.1	No alias	REM-type transcription factor	0.05	Orthogroups_2024-Update
Sobic.K044414.1	No alias	REM-type transcription factor	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predicted GO
MF	GO:0005216	ion channel activity	IEP	Predicted GO
CC	GO:0005739	mitochondrion	IEP	Predicted GO
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO
MF	GO:0016984	ribulose-bisphosphate carboxylase activity	IEP	Predicted GO
MF	GO:0022838	substrate-specific channel activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	129	207

External Links

No external refs found!