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  5. Solyc01g017140

Solyc01g017140


Description : Protein Ycf2 (AHRD V3.3 *-* YCF2_SOLLC)


Gene families : OG_42_0001300 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001300_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g017140
Cluster HCCA clusters: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
Solyc04g050840 No alias Protein Ycf2 (AHRD V3.3 *-* U3R4Y1_9ASTE) 0.03 Orthogroups_2024-Update
Solyc09g031800 No alias Protein Ycf2 (AHRD V3.3 *-* YCF2_TOBAC) 0.03 Orthogroups_2024-Update
Solyc12g035790 No alias Protein Ycf2 (AHRD V3.3 *-* YCF2_SOLLC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 20 89
No external refs found!