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  5. HORVU2Hr1G040400.1

HORVU2Hr1G040400.1


Description : LAV-VAL-type transcription factor & regulatory protein *(VAL) of PRC1 complex


Gene families : OG_42_0001758 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001758_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G040400.1
Cluster HCAA Clusters: Cluster_331

Target Alias Description ECC score Gene Family Method Actions
Solyc06g082520 No alias B3 domain-containing protein (AHRD V3.3 *** W9SAB7_9ROSA) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006788 heme oxidation IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009539 photosystem II reaction center IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 292 391
No external refs found!