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  5. HORVU2Hr1G041270.2

HORVU2Hr1G041270.2


Description : Unknown function


Gene families : OG_42_0004123 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G041270.2
Cluster HCAA Clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
149722 No alias light harvesting complex photosystem II 0.02 Orthogroups_2024-Update
At3g08940 No alias Chlorophyll a-b binding protein CP29.2, chloroplastic... 0.04 Orthogroups_2024-Update
At5g01530 No alias Chlorophyll a-b binding protein CP29.1, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi1g24870 No alias light harvesting complex photosystem II 0.06 Orthogroups_2024-Update
Brara.B00018.1 No alias component *(LHCb4) of LHC-II complex 0.04 Orthogroups_2024-Update
Brara.E03123.1 No alias component *(LHCb4) of LHC-II complex 0.08 Orthogroups_2024-Update
Cre17.g720250 No alias light harvesting complex photosystem II 0.04 Orthogroups_2024-Update
Glyma.01G115900 No alias light harvesting complex photosystem II 0.05 Orthogroups_2024-Update
Glyma.03G060300 No alias light harvesting complex photosystem II 0.08 Orthogroups_2024-Update
Kfl00258_0020 kfl00258_0020_v1.1 (at5g01530 : 324.0) light harvesting complex photosystem... 0.04 Orthogroups_2024-Update
LOC_Os07g37240 No alias chlorophyll A-B binding protein, putative, expressed 0.06 Orthogroups_2024-Update
MA_129206g0010 No alias (at2g40100 : 288.0) Lhcb4:3 protein (Lhcb4.3, light... 0.02 Orthogroups_2024-Update
Mp1g16850.1 No alias component LHCb4 of LHC-II complex 0.05 Orthogroups_2024-Update
PSME_00005803-RA No alias (at3g08940 : 324.0) Lhcb4.2 protein (Lhcb4.2, protein... 0.03 Orthogroups_2024-Update
Potri.006G099500 No alias light harvesting complex photosystem II 0.04 Orthogroups_2024-Update
Pp1s155_34V6 No alias chlorophyll a b binding 0.04 Orthogroups_2024-Update
Pp1s472_15V6 No alias chlorophyll a b binding 0.05 Orthogroups_2024-Update
Seita.2G351600.1 No alias component *(LHCb4) of LHC-II complex 0.05 Orthogroups_2024-Update
Sobic.002G338000.1 No alias component *(LHCb4) of LHC-II complex 0.06 Orthogroups_2024-Update
Solyc09g014520 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.07 Orthogroups_2024-Update
Sopen09g007360 No alias Chlorophyll A-B binding protein 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 14 90
No external refs found!