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  5. HORVU2Hr1G042560.4

HORVU2Hr1G042560.4


Description : RNA editing factor *(ORRM2)


Gene families : OG_42_0000107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G042560.4
Cluster HCAA Clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
Bradi3g14640 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 Orthogroups_2024-Update
Glyma.08G000100 No alias glycine-rich RNA-binding protein 2 0.05 Orthogroups_2024-Update
LOC_Os03g61990 No alias glycine-rich RNA-binding protein 7, putative, expressed 0.02 Orthogroups_2024-Update
MA_85849g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00012406-RA No alias (at3g20930 : 101.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update
Seita.2G062600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G021300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen03g019840 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 40 102
No external refs found!